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Plant Transcription
Factor Database
v4.0
Previous version:
v3.0
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Traes_3DL_4A4D552B2.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bZIP | ||||||||
Protein Properties | Length: 84aa MW: 9835.36 Da PI: 11.5849 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 34.6 | 4e-11 | 37 | 70 | 4 | 37 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvke 37 +k err+++NReAA++sR+RKka++++Le+ Traes_3DL_4A4D552B2.1 37 SKTERRLAQNREAAKKSRLRKKAYVQNLETSRVR 70 799*************************985444 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50217 | 9.484 | 36 | 84 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.0E-8 | 36 | 80 | No hit | No description |
SuperFamily | SSF57959 | 1.76E-7 | 38 | 81 | No hit | No description |
Pfam | PF00170 | 1.6E-8 | 38 | 74 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 41 | 56 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 84 aa Download sequence Send to blast |
MLLYTPCSNS VPLFFPLVSF AQRKHGSTRK DGKLVDSKTE RRLAQNREAA KKSRLRKKAY 60 VQNLETSRVR LQQMEQELQR ARSQ |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | JX424322 | 1e-100 | JX424322.1 Triticum urartu basic leucine zipper protein mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006645055.1 | 3e-31 | PREDICTED: transcription factor TGA2-like isoform X2 | ||||
Refseq | XP_015698161.1 | 3e-31 | PREDICTED: transcription factor TGA2-like isoform X1 | ||||
Refseq | XP_015698158.1 | 3e-31 | PREDICTED: transcription factor TGA2-like isoform X1 | ||||
Swissprot | P43273 | 6e-19 | TGA2_ARATH; Transcription factor TGA2 | ||||
TrEMBL | W5D9M2 | 1e-55 | W5D9M2_WHEAT; Uncharacterized protein | ||||
STRING | MLOC_65998.3 | 3e-32 | (Hordeum vulgare) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP25378 | 4 | 5 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08320.2 | 5e-22 | bZIP family protein |
Publications ? help Back to Top | |||
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